#!/usr/bin/python

import os, csv, sys
from TF_Module import *

#Example of using the class TF_Module

#Data of TF-genes binding relaton
TF_gene_relation = 'protein-dna_interactions_Gid.txt'

#Create an object for the calss TF_Module
ObjectTF = TF_Module(TF_gene_relation)

#A list of co-regulated genes
Co_reg_genes = ['AGA1', 'FAR1', 'FUS1', 'GPA1', 'KAR4', 'SST2', 'STE12', 'STE2', 'STE6', 'TEC1']

#Find the TF module that regulates the co-regulated genes
TF_module = ObjectTF. TF_Module_Greedy(Co_reg_genes)

#print result:
print 'The TF module is:', TF_module